ffpe breast tissue sample blocks Search Results


ffpe breast tissue sample blocks  (BioIVT Inc)
90
BioIVT Inc ffpe breast tissue sample blocks
Ffpe Breast Tissue Sample Blocks, supplied by BioIVT Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/ffpe breast tissue sample blocks/product/BioIVT Inc
Average 90 stars, based on 1 article reviews
ffpe breast tissue sample blocks - by Bioz Stars, 2026-03
90/100 stars
  Buy from Supplier
human tumor and adjacent normal tissue sections from single ffpe blocks breast normal/tumor  (BioChain Institute)
90
BioChain Institute human tumor and adjacent normal tissue sections from single ffpe blocks breast normal/tumor
Pathology classification, age and sex were provided by the <t>vendor</t> <t>(BioChain).</t> Each image spans the width of a standard charged microscope slide, where the tissue is visible under the paraffin skin. On-slide RNAPII-Ser5p <t>FFPE-CUTAC</t> was applied to slides in parallel, using a total of four slides each for 100 separate samples in all to produce the data analyzed in this study.
Human Tumor And Adjacent Normal Tissue Sections From Single Ffpe Blocks Breast Normal/Tumor, supplied by BioChain Institute, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/human tumor and adjacent normal tissue sections from single ffpe blocks breast normal/tumor/product/BioChain Institute
Average 90 stars, based on 1 article reviews
human tumor and adjacent normal tissue sections from single ffpe blocks breast normal/tumor - by Bioz Stars, 2026-03
90/100 stars
  Buy from Supplier
formalin-fixed, paraffin-embedded (ffpe) breast cancer tissue block  (Discovery Life Sciences Inc)
90
Discovery Life Sciences Inc formalin-fixed, paraffin-embedded (ffpe) breast cancer tissue block
a Xenium spatial plot for <t>ERBB2</t> <t>(HER2—gray),</t> ESR1 (estrogen receptor—green), and PGR (progesterone receptor—magenta) decoded transcripts. Scale bar = 1 mm. b Closer view of triple-positive ROI. Scale bar = 0.2 mm. c Corresponding H&E image. d Cell types contained within ROI reveal that this is a DCIS #2 tumor epithelium. e Individual Xenium spatial plots from ( b ). f Chromium scFFPE-seq yields only about 30 cells that are positive for PGR , but these cells do not express ERBB2 or ESR1 . g Triple-positive region is identified in Visium (given a priori knowledge from Xenium) and is h part of a distinct cluster (see Fig. ). i Spot interpolation (see Supp. Fig. ) provides cell type frequencies within each Visium spot. Color code legend is shown in ( d ). j Visium H&E and four representative differentially expressed genes in the tumor epithelium (94 genes; log 2 FC > 1.5; p -value < 0.05) revealed by Visium data across the whole transcriptome. Scale bar = 1 mm. Differential expression was performed in Loupe Browser (see “Methods”), which performs a variant of the negative binomial exact test (for small gene counts), or a fast asymptotic beta test derived from edgeR (for large gene counts). P -values were adjusted for multiple testing using the Benjamini–Hochberg procedure to control for the false discovery rate. Both the Xenium and Visium experiments were performed in replicate on two serial sections, with one representative section from each technology shown here.
Formalin Fixed, Paraffin Embedded (Ffpe) Breast Cancer Tissue Block, supplied by Discovery Life Sciences Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/formalin-fixed, paraffin-embedded (ffpe) breast cancer tissue block/product/Discovery Life Sciences Inc
Average 90 stars, based on 1 article reviews
formalin-fixed, paraffin-embedded (ffpe) breast cancer tissue block - by Bioz Stars, 2026-03
90/100 stars
  Buy from Supplier
clinical ffpe breast cancer tissue blocks  (BioNTech)
90
BioNTech clinical ffpe breast cancer tissue blocks
a Xenium spatial plot for <t>ERBB2</t> <t>(HER2—gray),</t> ESR1 (estrogen receptor—green), and PGR (progesterone receptor—magenta) decoded transcripts. Scale bar = 1 mm. b Closer view of triple-positive ROI. Scale bar = 0.2 mm. c Corresponding H&E image. d Cell types contained within ROI reveal that this is a DCIS #2 tumor epithelium. e Individual Xenium spatial plots from ( b ). f Chromium scFFPE-seq yields only about 30 cells that are positive for PGR , but these cells do not express ERBB2 or ESR1 . g Triple-positive region is identified in Visium (given a priori knowledge from Xenium) and is h part of a distinct cluster (see Fig. ). i Spot interpolation (see Supp. Fig. ) provides cell type frequencies within each Visium spot. Color code legend is shown in ( d ). j Visium H&E and four representative differentially expressed genes in the tumor epithelium (94 genes; log 2 FC > 1.5; p -value < 0.05) revealed by Visium data across the whole transcriptome. Scale bar = 1 mm. Differential expression was performed in Loupe Browser (see “Methods”), which performs a variant of the negative binomial exact test (for small gene counts), or a fast asymptotic beta test derived from edgeR (for large gene counts). P -values were adjusted for multiple testing using the Benjamini–Hochberg procedure to control for the false discovery rate. Both the Xenium and Visium experiments were performed in replicate on two serial sections, with one representative section from each technology shown here.
Clinical Ffpe Breast Cancer Tissue Blocks, supplied by BioNTech, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/clinical ffpe breast cancer tissue blocks/product/BioNTech
Average 90 stars, based on 1 article reviews
clinical ffpe breast cancer tissue blocks - by Bioz Stars, 2026-03
90/100 stars
  Buy from Supplier
ffpe breast tumor (infiltrating ductal carcinoma) tissue samples oro-2965, oro-2869 and oro-2820  (Asterand Inc)
90
Asterand Inc ffpe breast tumor (infiltrating ductal carcinoma) tissue samples oro-2965, oro-2869 and oro-2820
a Xenium spatial plot for <t>ERBB2</t> <t>(HER2—gray),</t> ESR1 (estrogen receptor—green), and PGR (progesterone receptor—magenta) decoded transcripts. Scale bar = 1 mm. b Closer view of triple-positive ROI. Scale bar = 0.2 mm. c Corresponding H&E image. d Cell types contained within ROI reveal that this is a DCIS #2 tumor epithelium. e Individual Xenium spatial plots from ( b ). f Chromium scFFPE-seq yields only about 30 cells that are positive for PGR , but these cells do not express ERBB2 or ESR1 . g Triple-positive region is identified in Visium (given a priori knowledge from Xenium) and is h part of a distinct cluster (see Fig. ). i Spot interpolation (see Supp. Fig. ) provides cell type frequencies within each Visium spot. Color code legend is shown in ( d ). j Visium H&E and four representative differentially expressed genes in the tumor epithelium (94 genes; log 2 FC > 1.5; p -value < 0.05) revealed by Visium data across the whole transcriptome. Scale bar = 1 mm. Differential expression was performed in Loupe Browser (see “Methods”), which performs a variant of the negative binomial exact test (for small gene counts), or a fast asymptotic beta test derived from edgeR (for large gene counts). P -values were adjusted for multiple testing using the Benjamini–Hochberg procedure to control for the false discovery rate. Both the Xenium and Visium experiments were performed in replicate on two serial sections, with one representative section from each technology shown here.
Ffpe Breast Tumor (Infiltrating Ductal Carcinoma) Tissue Samples Oro 2965, Oro 2869 And Oro 2820, supplied by Asterand Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/ffpe breast tumor (infiltrating ductal carcinoma) tissue samples oro-2965, oro-2869 and oro-2820/product/Asterand Inc
Average 90 stars, based on 1 article reviews
ffpe breast tumor (infiltrating ductal carcinoma) tissue samples oro-2965, oro-2869 and oro-2820 - by Bioz Stars, 2026-03
90/100 stars
  Buy from Supplier
formalin-fixed paraffin-embedded (ffpe) breast cancers tissue blocks  (Bank of Guangzhou Co Ltd)
90
Bank of Guangzhou Co Ltd formalin-fixed paraffin-embedded (ffpe) breast cancers tissue blocks
a Xenium spatial plot for <t>ERBB2</t> <t>(HER2—gray),</t> ESR1 (estrogen receptor—green), and PGR (progesterone receptor—magenta) decoded transcripts. Scale bar = 1 mm. b Closer view of triple-positive ROI. Scale bar = 0.2 mm. c Corresponding H&E image. d Cell types contained within ROI reveal that this is a DCIS #2 tumor epithelium. e Individual Xenium spatial plots from ( b ). f Chromium scFFPE-seq yields only about 30 cells that are positive for PGR , but these cells do not express ERBB2 or ESR1 . g Triple-positive region is identified in Visium (given a priori knowledge from Xenium) and is h part of a distinct cluster (see Fig. ). i Spot interpolation (see Supp. Fig. ) provides cell type frequencies within each Visium spot. Color code legend is shown in ( d ). j Visium H&E and four representative differentially expressed genes in the tumor epithelium (94 genes; log 2 FC > 1.5; p -value < 0.05) revealed by Visium data across the whole transcriptome. Scale bar = 1 mm. Differential expression was performed in Loupe Browser (see “Methods”), which performs a variant of the negative binomial exact test (for small gene counts), or a fast asymptotic beta test derived from edgeR (for large gene counts). P -values were adjusted for multiple testing using the Benjamini–Hochberg procedure to control for the false discovery rate. Both the Xenium and Visium experiments were performed in replicate on two serial sections, with one representative section from each technology shown here.
Formalin Fixed Paraffin Embedded (Ffpe) Breast Cancers Tissue Blocks, supplied by Bank of Guangzhou Co Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/formalin-fixed paraffin-embedded (ffpe) breast cancers tissue blocks/product/Bank of Guangzhou Co Ltd
Average 90 stars, based on 1 article reviews
formalin-fixed paraffin-embedded (ffpe) breast cancers tissue blocks - by Bioz Stars, 2026-03
90/100 stars
  Buy from Supplier

Image Search Results


Pathology classification, age and sex were provided by the vendor (BioChain). Each image spans the width of a standard charged microscope slide, where the tissue is visible under the paraffin skin. On-slide RNAPII-Ser5p FFPE-CUTAC was applied to slides in parallel, using a total of four slides each for 100 separate samples in all to produce the data analyzed in this study.

Journal: bioRxiv

Article Title: Direct measurement of RNA Polymerase II hypertranscription in cancer FFPE samples

doi: 10.1101/2024.02.28.582647

Figure Lengend Snippet: Pathology classification, age and sex were provided by the vendor (BioChain). Each image spans the width of a standard charged microscope slide, where the tissue is visible under the paraffin skin. On-slide RNAPII-Ser5p FFPE-CUTAC was applied to slides in parallel, using a total of four slides each for 100 separate samples in all to produce the data analyzed in this study.

Article Snippet: The following pairs of human tumor and adjacent normal 5 μm tissue sections from single FFPE blocks were purchased from Biochain, Inc: Breast Normal/Tumor cat. no. T8235086PP/PT; Colon Normal/Tumor cat. no. T8235090PP/PT; Kidney Normal/Tumor cat. no. T8235142PP/PT; Liver Normal/Tumor cat. no. T8235149PP/PT; Lung Normal/Tumor cat. no. T8235152PP/PT; Rectum Normal/Tumor cat. no. T8235206PP/PT; Stomach Normal/Tumor cat. no. T8235248PP/PT.

Techniques: Microscopy

a Xenium spatial plot for ERBB2 (HER2—gray), ESR1 (estrogen receptor—green), and PGR (progesterone receptor—magenta) decoded transcripts. Scale bar = 1 mm. b Closer view of triple-positive ROI. Scale bar = 0.2 mm. c Corresponding H&E image. d Cell types contained within ROI reveal that this is a DCIS #2 tumor epithelium. e Individual Xenium spatial plots from ( b ). f Chromium scFFPE-seq yields only about 30 cells that are positive for PGR , but these cells do not express ERBB2 or ESR1 . g Triple-positive region is identified in Visium (given a priori knowledge from Xenium) and is h part of a distinct cluster (see Fig. ). i Spot interpolation (see Supp. Fig. ) provides cell type frequencies within each Visium spot. Color code legend is shown in ( d ). j Visium H&E and four representative differentially expressed genes in the tumor epithelium (94 genes; log 2 FC > 1.5; p -value < 0.05) revealed by Visium data across the whole transcriptome. Scale bar = 1 mm. Differential expression was performed in Loupe Browser (see “Methods”), which performs a variant of the negative binomial exact test (for small gene counts), or a fast asymptotic beta test derived from edgeR (for large gene counts). P -values were adjusted for multiple testing using the Benjamini–Hochberg procedure to control for the false discovery rate. Both the Xenium and Visium experiments were performed in replicate on two serial sections, with one representative section from each technology shown here.

Journal: Nature Communications

Article Title: High resolution mapping of the tumor microenvironment using integrated single-cell, spatial and in situ analysis

doi: 10.1038/s41467-023-43458-x

Figure Lengend Snippet: a Xenium spatial plot for ERBB2 (HER2—gray), ESR1 (estrogen receptor—green), and PGR (progesterone receptor—magenta) decoded transcripts. Scale bar = 1 mm. b Closer view of triple-positive ROI. Scale bar = 0.2 mm. c Corresponding H&E image. d Cell types contained within ROI reveal that this is a DCIS #2 tumor epithelium. e Individual Xenium spatial plots from ( b ). f Chromium scFFPE-seq yields only about 30 cells that are positive for PGR , but these cells do not express ERBB2 or ESR1 . g Triple-positive region is identified in Visium (given a priori knowledge from Xenium) and is h part of a distinct cluster (see Fig. ). i Spot interpolation (see Supp. Fig. ) provides cell type frequencies within each Visium spot. Color code legend is shown in ( d ). j Visium H&E and four representative differentially expressed genes in the tumor epithelium (94 genes; log 2 FC > 1.5; p -value < 0.05) revealed by Visium data across the whole transcriptome. Scale bar = 1 mm. Differential expression was performed in Loupe Browser (see “Methods”), which performs a variant of the negative binomial exact test (for small gene counts), or a fast asymptotic beta test derived from edgeR (for large gene counts). P -values were adjusted for multiple testing using the Benjamini–Hochberg procedure to control for the false discovery rate. Both the Xenium and Visium experiments were performed in replicate on two serial sections, with one representative section from each technology shown here.

Article Snippet: A single formalin-fixed, paraffin-embedded (FFPE) breast cancer tissue block (TNM stage T2N1M0, ER + /HER2 + /PR −) was collected on 2021-07-26 and obtained from Discovery Life Sciences.

Techniques: Expressing, Variant Assay, Derivative Assay

Antibodies used for the post-Xenium IF staining

Journal: Nature Communications

Article Title: High resolution mapping of the tumor microenvironment using integrated single-cell, spatial and in situ analysis

doi: 10.1038/s41467-023-43458-x

Figure Lengend Snippet: Antibodies used for the post-Xenium IF staining

Article Snippet: A single formalin-fixed, paraffin-embedded (FFPE) breast cancer tissue block (TNM stage T2N1M0, ER + /HER2 + /PR −) was collected on 2021-07-26 and obtained from Discovery Life Sciences.

Techniques: